USC-OGP 2-DE database Two-dimensional polyacrylamide gel electrophoresis database

USC-OGP 2-DE database  Search by                Maps             Select Remote Interfaces [All Interfaces] SWISS-2DPAGE World-2DPAGE Portal World-2DPAGE Repository Exclude local DBs has only effect if a remote interface is selected

Searching in 'USC-OGP 2-DE database' for entry matching: CALD1_HUMAN USC-OGP 2-DE database:  CALD1_HUMAN CALD1_HUMAN General information about the entry View entry in simple text format Entry name CALD1_HUMAN Primary accession number Q05682 integrated into USC-OGP 2-DE database on  January 17, 2017 (release 1) 2D Annotations were last modified on January 17, 2017 (version 1) General Annotations were last modified on  April 5, 2017 (version 2) Name and origin of the protein Description RecName: Full=Caldesmon; Short=CDM;. Gene name Name=CALD1 Synonyms=CAD, CDM Annotated species Homo sapiens (Human) [TaxID: 9606] Taxonomy Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. References [1]   2D GEL CHARACTERIZATION Author 1., Author 2. Submitted (Mar-2011) to Current 2D PAGE maps for identified proteins How to interpret a protein PLATELET_4-5 {PLATELET 4-5} Homo sapiens (Human)   map experimental info   PLATELET_4-5 MAP LOCATIONS: SPOT OGP-0222: pI=4.79; Mw=20772 SPOT OGP-0226: pI=4.56; Mw=20073 PLATELET_4-7 {PLATELET 4-7} Homo sapiens (Human)   map experimental info   PLATELET_4-7 MAP LOCATIONS: SPOT OGP-0299: pI=5.77; Mw=75345 SPOT OGP-0300: pI=5.72; Mw=75113 SPOT OGP-0304: pI=5.91; Mw=74192 UVEAL_MELANOMA_3-10 {UVEAL MELANOMA 3-10} Homo sapiens (Human)   map experimental info   UVEAL_MELANOMA_3-10 MAP LOCATIONS: SPOT OGP-1117: pI=5.89; Mw=87622 SPOT OGP-1119: pI=5.98; Mw=86732 SPOT OGP-1120: pI=6.09; Mw=84978 SPOT OGP-1121: pI=5.77; Mw=83686 Cross-references UniProtKB/Swiss-Prot Q05682; CALD1_HUMAN. 2D PAGE maps for identified proteins How to interpret a protein map You may obtain an estimated location of the protein on various 2D PAGE maps, provided the whole amino acid sequence is known. The estimation is obtained according to the computed protein's pI and Mw. Warning 1: the displayed region reflects an area around the theoretical pI and molecular weight of the protein and is only provided for the user's information. It should be used with caution, as the experimental and theoretical positions of a protein may differ significantly. Warning 2: the 2D PAGE map is built on demand. This may take some few seconds to be computed. External data extracted from UniProtKB/Swiss-Prot Extracted from UniProtKB/Swiss-Prot, release: 0.0 Entry name CALD1_HUMAN Primary accession number Q05682 Secondary accession number(s) A8K0X1 Q13978 Q13979 Q14741 Q14742 Q9UD91 Sequence was last modified on  June 28, 2011 (version 3) Annotations were last modified on  March 15, 2017 (version 165) Name and origin of the protein Description RecName: Full=Caldesmon; Short=CDM; Gene name Name=CALD1 Synonyms=CAD, CDM Encoded on Name=CALD1; Synonyms=CAD, CDM Keywords Actin-binding; Alternative splicing; Calmodulin-binding; Complete proteome; Cytoplasm; Cytoskeleton; Muscle protein; Phosphoprotein; Polymorphism; Reference proteome; Repeat. Copyright Copyrighted by the UniProt Consortium, see http://www.uniprot.org/help/license. Distributed under the Creative Commons Attribution-NoDerivs License Cross-references EMBL M64110; AAA35636.1; -; mRNA EMBL M83216; AAA58420.1; -; mRNA EMBL M83216; AAA58419.1; -; mRNA EMBL D90452; BAA14418.1; -; mRNA EMBL D90453; BAA14419.1; -; mRNA EMBL AK289686; BAF82375.1; -; mRNA EMBL AC019014; -; NOT_ANNOTATED_CDS; Genomic_DNA EMBL AC083870; -; NOT_ANNOTATED_CDS; Genomic_DNA EMBL BC040354; AAH40354.1; -; mRNA CCDS CCDS47716.1; -. [Q05682-3]; . CCDS CCDS47717.1; -. [Q05682-5]; . CCDS CCDS5834.1; -. [Q05682-4]; . CCDS CCDS5835.1; -. [Q05682-1]; . CCDS CCDS5836.2; -. [Q05682-6]; . PIR JH0628; JH0628; . RefSeq NP_004333.1; NM_004342.6. [Q05682-4]; . RefSeq NP_149129.2; NM_033138.3. [Q05682-1]; . RefSeq NP_149130.1; NM_033139.3. [Q05682-3]; . RefSeq NP_149131.1; NM_033140.3. [Q05682-5]; . RefSeq NP_149347.2; NM_033157.3. [Q05682-6]; . RefSeq XP_016868140.1; XM_017012651.1. [Q05682-2]; . RefSeq XP_016868141.1; XM_017012652.1. [Q05682-4]; . UniGene Hs.490203; -; . ProteinModelPortal Q05682; -; . BioGrid 107251; 44; . IntAct Q05682; 26; . STRING 9606.ENSP00000354826; -; . iPTMnet Q05682; -; . PhosphoSitePlus Q05682; -; . SwissPalm Q05682; -; . BioMuta CALD1; -; . DMDM 338817891; -; . OGP Q05682; -; . EPD Q05682; -; . MaxQB Q05682; -; . PaxDb Q05682; -; . PeptideAtlas Q05682; -; . PRIDE Q05682; -; . DNASU 800; -; . Ensembl ENST00000361675; ENSP00000354826; ENSG00000122786. [Q05682-1]; . Ensembl ENST00000361901; ENSP00000354513; ENSG00000122786. [Q05682-4]; . Ensembl ENST00000393118; ENSP00000376826; ENSG00000122786. [Q05682-3]; . Ensembl ENST00000417172; ENSP00000398826; ENSG00000122786. [Q05682-4]; . Ensembl ENST00000422748; ENSP00000395710; ENSG00000122786. [Q05682-6]; . Ensembl ENST00000424922; ENSP00000393621; ENSG00000122786. [Q05682-5]; . GeneID 800; -; . KEGG hsa:800; -; . UCSC uc003vrz.4; human. [Q05682-1]; . CTD 800; -; . DisGeNET 800; -; . GeneCards CALD1; -; . HGNC HGNC:1441; CALD1; . HPA CAB000006; -; . HPA HPA008066; -; . HPA HPA017330; -; . MIM 114213; gene; . neXtProt NX_Q05682; -; . OpenTargets ENSG00000122786; -; . PharmGKB PA26034; -; . eggNOG ENOG410IH1F; Eukaryota; . eggNOG ENOG410ZMZI; LUCA; . GeneTree ENSGT00730000111125; -; . HOGENOM HOG000013012; -; . HOVERGEN HBG050785; -; . InParanoid Q05682; -; . KO K12327; -; . OMA QIAYQRN; -; . OrthoDB EOG091G0I0H; -; . PhylomeDB Q05682; -; . TreeFam TF331771; -; . Reactome R-HSA-445355; Smooth Muscle Contraction; . SIGNOR Q05682; -; . ChiTaRS CALD1; human; . GeneWiki Caldesmon; -; . GenomeRNAi 800; -; . PRO PR:Q05682; -; . Proteomes UP000005640; Chromosome 7; . Bgee ENSG00000122786; -; . CleanEx HS_CAD; -; . CleanEx HS_CALD1; -; . ExpressionAtlas Q05682; baseline and differential; . Genevisible Q05682; HS; . GO GO:0015629; C:actin cytoskeleton; IDA:HPA; . GO GO:0005856; C:cytoskeleton; TAS:UniProtKB; . GO GO:0005829; C:cytosol; TAS:Reactome; . GO GO:0043231; C:intracellular membrane-bounded organelle; IDA:HPA; . GO GO:0030016; C:myofibril; IEA:UniProtKB-SubCell; . GO GO:0005886; C:plasma membrane; IDA:HPA; . GO GO:0003779; F:actin binding; TAS:ProtInc; . GO GO:0045296; F:cadherin binding; IDA:BHF-UCL; . GO GO:0005516; F:calmodulin binding; TAS:ProtInc; . GO GO:0005523; F:tropomyosin binding; TAS:ProtInc; . GO GO:0006928; P:movement of cell or subcellular component; TAS:UniProtKB; . GO GO:0006936; P:muscle contraction; TAS:Reactome; . InterPro IPR006017; Caldesmon; . InterPro IPR006018; Caldesmon_LSP; . PANTHER PTHR18949; PTHR18949; 1; . PANTHER PTHR18949:SF3; PTHR18949:SF3; 1; . Pfam PF02029; Caldesmon; 2; . PRINTS PR01076; CALDESMON; .

Gateways to other related servers

• The World-2DPAGE Constellation - Entry point to the world-wide 2-DPAGE resources.
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• World-2DPAGE Portal - A dynamic portal to query simultaneously world-wide gel-based proteomics databases.
• SWISS-2DPAGE - The Geneva Two-dimensional polyacrylamide gel electrophoresis database.
• ExPASy - The resources web server of the Swiss Institute of Bioinformatics

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